PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0188s0023.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 263aa    MW: 28895.7 Da    PI: 9.3044
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0188s0023.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.8e-18114164255
                  AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                          +y+GVr+++ +g+++AeIrdp+ +g  +r++lg++ t  eAa+a+++a+ +l+g
  Kalax.0188s0023.1.p 114 HYRGVRQRP-WGKFAAEIRDPKRRG--ARVWLGTYETDVEAARAYDRAAFELRG 164
                          7********.**********96554..**********99*************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.9E-31113173IPR001471AP2/ERF domain
PfamPF008476.5E-14114164IPR001471AP2/ERF domain
PROSITE profilePS5103223.868114172IPR001471AP2/ERF domain
SuperFamilySSF541716.21E-22114174IPR016177DNA-binding domain
SMARTSM003802.4E-36114178IPR001471AP2/ERF domain
CDDcd000187.10E-28114172No hitNo description
PRINTSPR003676.7E-13115126IPR001471AP2/ERF domain
PRINTSPR003676.7E-13154174IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MAAAADFSAL QLIKQHLFDG LASPLLKPEP SASQTQMAQI PDSLELDGVY TSLVSSDLGA  60
VDLARRKPSV SSRKPALNIS LPSKTEWNEY AEPTQPQLAA AASKPAPKRS DRRHYRGVRQ  120
RPWGKFAAEI RDPKRRGARV WLGTYETDVE AARAYDRAAF ELRGCKAILN FPLELAQSMD  180
KPPAVGVRRL RSEAEERPEA KKVKTEEGVD GVNEMALTPS SWTAFWNFDD NGNTKSNGML  240
DWPLTSPLSP HPALGYSQLI VL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-28113175466ATERF1
3gcc_A2e-28113175466ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010275423.17e-61PREDICTED: ethylene-responsive transcription factor ERF105-like
SwissprotO803415e-55EF102_ARATH; Ethylene-responsive transcription factor 5
TrEMBLA0A067L5Z56e-58A0A067L5Z5_JATCU; Uncharacterized protein
STRINGBra024953.1-P5e-54(Brassica rapa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.18e-55ethylene responsive element binding factor 5